Bioinformatics for Beginners Book

Bioinformatics for Beginners


  • Author : Supratim Choudhuri
  • Publisher : Elsevier
  • Release Date : 2014-05-09
  • Genre: Medical
  • Pages : 238
  • ISBN 10 : 9780124105102

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Bioinformatics for Beginners Excerpt :

Bioinformatics for Beginners: Genes, Genomes, Molecular Evolution, Databases and Analytical Tools provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses the relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis and demonstrates, with examples, targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis, also pointing to further study options. Avoids non-essential coverage, yet fully describes the field for beginners Explains the molecular basis of evolution to place bioinformatic analysis in biological context Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools Contains over 100 figures that aid in concept discovery and illustration

Bioinformatics For Dummies Book
Score: 5
From 3 Ratings

Bioinformatics For Dummies


  • Author : Jean-Michel Claverie
  • Publisher : John Wiley & Sons
  • Release Date : 2011-02-10
  • Genre: Science
  • Pages : 464
  • ISBN 10 : 1118051106

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Bioinformatics For Dummies Excerpt :

Were you always curious about biology but were afraid to sit through long hours of dense reading? Did you like the subject when you were in high school but had other plans after you graduated? Now you can explore the human genome and analyze DNA without ever leaving your desktop! Bioinformatics For Dummies is packed with valuable information that introduces you to this exciting new discipline. This easy-to-follow guide leads you step by step through every bioinformatics task that can be done over the Internet. Forget long equations, computer-geek gibberish, and installing bulky programs that slow down your computer. You’ll be amazed at all the things you can accomplish just by logging on and following these trusty directions. You get the tools you need to: Analyze all types of sequences Use all types of databases Work with DNA and protein sequences Conduct similarity searches Build a multiple sequence alignment Edit and publish alignments Visualize protein 3-D structures Construct phylogenetic trees This up-to-date second edition includes newly created and popular databases and Internet programs as well as multiple new genomes. It provides tips for using servers and places to seek resources to find out about what’s going on in the bioinformatics world. Bioinformatics For Dummies will show you how to get the most out of your PC and the right Web tools so you’ll be searching databases and analyzing sequences like a pro!

Beginning Perl for Bioinformatics Book
Score: 3
From 3 Ratings

Beginning Perl for Bioinformatics


  • Author : James Tisdall
  • Publisher : "O'Reilly Media, Inc."
  • Release Date : 2001-10-22
  • Genre: Computers
  • Pages : 386
  • ISBN 10 : 9780596550479

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Beginning Perl for Bioinformatics Excerpt :

With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers: Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output

Bioinformatics Programming in Python Book

Bioinformatics Programming in Python


  • Author : Ruediger-Marcus Flaig
  • Publisher : John Wiley & Sons
  • Release Date : 2011-10-05
  • Genre: Medical
  • Pages : 428
  • ISBN 10 : 9783527644902

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Bioinformatics Programming in Python Excerpt :

This first introductory book designed to train novice programmers is based on a student course taught by the author, and has been optimized for biology students without previous experience in programming. By interspersing theory chapters with numerous small and large programming exercises, the author quickly shows readers how to do their own programming, and throughout uses anecdotes and real-life examples from the biosciences to 'spice up' the text. This practical book thus teaches essential programming skills for life scientists who want -- or need -- to write their own bioinformatics software tools.

Basics of Bioinformatics Book

Basics of Bioinformatics


  • Author : Rui Jiang
  • Publisher : Springer Science & Business Media
  • Release Date : 2013-11-26
  • Genre: Computers
  • Pages : 395
  • ISBN 10 : 9783642389511

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Basics of Bioinformatics Excerpt :

This book outlines 11 courses and 15 research topics in bioinformatics, based on curriculums and talks in a graduate summer school on bioinformatics that was held in Tsinghua University. The courses include: Basics for Bioinformatics, Basic Statistics for Bioinformatics, Topics in Computational Genomics, Statistical Methods in Bioinformatics, Algorithms in Computational Biology, Multivariate Statistical Methods in Bioinformatics Research, Association Analysis for Human Diseases: Methods and Examples, Data Mining and Knowledge Discovery Methods with Case Examples, Applied Bioinformatics Tools, Foundations for the Study of Structure and Function of Proteins, Computational Systems Biology Approaches for Deciphering Traditional Chinese Medicine, and Advanced Topics in Bioinformatics and Computational Biology. This book can serve as not only a primer for beginners in bioinformatics, but also a highly summarized yet systematic reference book for researchers in this field. Rui Jiang and Xuegong Zhang are both professors at the Department of Automation, Tsinghua University, China. Professor Michael Q. Zhang works at the Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

Essential Bioinformatics Book
Score: 4.5
From 6 Ratings

Essential Bioinformatics


  • Author : Jin Xiong
  • Publisher : Cambridge University Press
  • Release Date : 2006-03-13
  • Genre: Science
  • Pages : null
  • ISBN 10 : 9781139450621

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Essential Bioinformatics Excerpt :

Essential Bioinformatics is a concise yet comprehensive textbook of bioinformatics, which provides a broad introduction to the entire field. Written specifically for a life science audience, the basics of bioinformatics are explained, followed by discussions of the state-of-the-art computational tools available to solve biological research problems. All key areas of bioinformatics are covered including biological databases, sequence alignment, genes and promoter prediction, molecular phylogenetics, structural bioinformatics, genomics and proteomics. The book emphasizes how computational methods work and compares the strengths and weaknesses of different methods. This balanced yet easily accessible text will be invaluable to students who do not have sophisticated computational backgrounds. Technical details of computational algorithms are explained with a minimum use of mathematical formulae; graphical illustrations are used in their place to aid understanding. The effective synthesis of existing literature as well as in-depth and up-to-date coverage of all key topics in bioinformatics make this an ideal textbook for all bioinformatics courses taken by life science students and for researchers wishing to develop their knowledge of bioinformatics to facilitate their own research.

Python Programming for Biology Book

Python Programming for Biology


  • Author : Tim J. Stevens
  • Publisher : Cambridge University Press
  • Release Date : 2015-02-12
  • Genre: Science
  • Pages : 721
  • ISBN 10 : 9780521895835

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Python Programming for Biology Excerpt :

This book introduces Python as a powerful tool for the investigation of problems in computational biology, for novices and experienced programmers alike.

Bioinformatics Algorithms Book

Bioinformatics Algorithms


  • Author : Phillip Compeau
  • Publisher : Unknown
  • Release Date : 1986-06
  • Genre: Uncategoriezed
  • Pages : null
  • ISBN 10 : 0990374637

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Bioinformatics Algorithms Excerpt :

Bioinformatics Algorithms: an Active Learning Approach is one of the first textbooks to emerge from the recent Massive Online Open Course (MOOC) revolution. A light-hearted and analogy-filled companion to the authors' acclaimed online course (http://coursera.org/course/bioinformatics), this book presents students with a dynamic approach to learning bioinformatics. It strikes a unique balance between practical challenges in modern biology and fundamental algorithmic ideas, thus capturing the interest of students of biology and computer science students alike.Each chapter begins with a central biological question, such as "Are There Fragile Regions in the Human Genome?" or "Which DNA Patterns Play the Role of Molecular Clocks?" and then steadily develops the algorithmic sophistication required to answer this question. Hundreds of exercises are incorporated directly into the text as soon as they are needed; readers can test their knowledge through automated coding challenges on Rosalind (http://rosalind.info), an online platform for learning bioinformatics.The textbook website (http://bioinformaticsalgorithms.org) directs readers toward additional educational materials, including video lectures and PowerPoint slides.

Bioinformatics Data Skills Book

Bioinformatics Data Skills


  • Author : Vince Buffalo
  • Publisher : "O'Reilly Media, Inc."
  • Release Date : 2015-07
  • Genre: Computers
  • Pages : 538
  • ISBN 10 : 9781449367510

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Bioinformatics Data Skills Excerpt :

Learn the data skills necessary for turning large sequencing datasets into reproducible and robust biological findings. With this practical guide, youâ??ll learn how to use freely available open source tools to extract meaning from large complex biological data sets. At no other point in human history has our ability to understand lifeâ??s complexities been so dependent on our skills to work with and analyze data. This intermediate-level book teaches the general computational and data skills you need to analyze biological data. If you have experience with a scripting language like Python, youâ??re ready to get started. Go from handling small problems with messy scripts to tackling large problems with clever methods and tools Process bioinformatics data with powerful Unix pipelines and data tools Learn how to use exploratory data analysis techniques in the R language Use efficient methods to work with genomic range data and range operations Work with common genomics data file formats like FASTA, FASTQ, SAM, and BAM Manage your bioinformatics project with the Git version control system Tackle tedious data processing tasks with with Bash scripts and Makefiles

Python for Biologists Book

Python for Biologists


  • Author : Martin Jones
  • Publisher : Createspace Independent Pub
  • Release Date : 2013
  • Genre: Computers
  • Pages : 229
  • ISBN 10 : UCR:31210023746751

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Python for Biologists Excerpt :

Python for biologists is a complete programming course for beginners that will give you the skills you need to tackle common biological and bioinformatics problems.

Bioinformatics Programming Using Python Book
Score: 4
From 3 Ratings

Bioinformatics Programming Using Python


  • Author : Mitchell L Model
  • Publisher : "O'Reilly Media, Inc."
  • Release Date : 2009-12-08
  • Genre: Computers
  • Pages : 528
  • ISBN 10 : 1449382908

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Bioinformatics Programming Using Python Excerpt :

Powerful, flexible, and easy to use, Python is an ideal language for building software tools and applications for life science research and development. This unique book shows you how to program with Python, using code examples taken directly from bioinformatics. In a short time, you'll be using sophisticated techniques and Python modules that are particularly effective for bioinformatics programming. Bioinformatics Programming Using Python is perfect for anyone involved with bioinformatics -- researchers, support staff, students, and software developers interested in writing bioinformatics applications. You'll find it useful whether you already use Python, write code in another language, or have no programming experience at all. It's an excellent self-instruction tool, as well as a handy reference when facing the challenges of real-life programming tasks. Become familiar with Python's fundamentals, including ways to develop simple applications Learn how to use Python modules for pattern matching, structured text processing, online data retrieval, and database access Discover generalized patterns that cover a large proportion of how Python code is used in bioinformatics Learn how to apply the principles and techniques of object-oriented programming Benefit from the "tips and traps" section in each chapter

Bioinformatics for Beginners Book

Bioinformatics for Beginners


  • Author : Supratim Choudhuri
  • Publisher : Academic Press
  • Release Date : 2014-05-12
  • Genre: Medical
  • Pages : 238
  • ISBN 10 : 0124104711

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Bioinformatics for Beginners Excerpt :

Bioinformatics for Beginners provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis, and demonstrates with examples targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis and points to many further study options. Avoids non-essential coverage yet fully describes the field for beginners - in approximately 200 pages of text Explains the molecular basis of evolution to place bioinformatic analysis in biological context Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools Over 100 figures aid in concept discovery and illustration

Python for Bioinformatics Book

Python for Bioinformatics


  • Author : Sebastian Bassi
  • Publisher : CRC Press
  • Release Date : 2017-08-07
  • Genre: Mathematics
  • Pages : 510
  • ISBN 10 : 9781351976954

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Python for Bioinformatics Excerpt :

In today's data driven biology, programming knowledge is essential in turning ideas into testable hypothesis. Based on the author’s extensive experience, Python for Bioinformatics, Second Edition helps biologists get to grips with the basics of software development. Requiring no prior knowledge of programming-related concepts, the book focuses on the easy-to-use, yet powerful, Python computer language. This new edition is updated throughout to Python 3 and is designed not just to help scientists master the basics, but to do more in less time and in a reproducible way. New developments added in this edition include NoSQL databases, the Anaconda Python distribution, graphical libraries like Bokeh, and the use of Github for collaborative development.

Python for Bioinformatics Book

Python for Bioinformatics


  • Author : Jason Kinser
  • Publisher : Jones & Bartlett Publishers
  • Release Date : 2010-10-25
  • Genre: Computers
  • Pages : 436
  • ISBN 10 : 9781449613075

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Python for Bioinformatics Excerpt :

Python for Bioinformatics provides a clear introduction to the Python programming language and instructs beginners on the development of simple programming exercises. Important Notice: The digital edition of this book is missing some of the images or content found in the physical edition.

Bioinformatics and Functional Genomics Book
Score: 5
From 1 Ratings

Bioinformatics and Functional Genomics


  • Author : Jonathan Pevsner
  • Publisher : John Wiley & Sons
  • Release Date : 2005-03-04
  • Genre: Science
  • Pages : 792
  • ISBN 10 : 9780471459170

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Bioinformatics and Functional Genomics Excerpt :

Wiley is proud to announce the publication of the first ever broad-based textbook introduction to Bioinformatics and Functional Genomics by a trained biologist, experienced researcher, and award-winning instructor. In this new text, author Jonathan Pevsner, winner of the 2001 Johns Hopkins University "Teacher of the Year" award, explains problem-solving using bioinformatic approaches using real examples such as breast cancer, HIV-1, and retinal-binding protein throughout. His book includes 375 figures and over 170 tables. Each chapter includes: Problems, discussion of Pitfalls, Boxes explaining key techniques and math/stats principles, Summary, Recommended Reading list, and URLs for freely available software. The text is suitable for professionals and students at every level, including those with little to no background in computer science.