Insight on Environmental Genomics Book

Insight on Environmental Genomics


  • Author : Denis Faure
  • Publisher : Elsevier
  • Release Date : 2016-07-11
  • Genre: Science
  • Pages : 174
  • ISBN 10 : 9780081010914

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Insight on Environmental Genomics Excerpt :

Bringing together the latest methodological and scientific progress in the various research areas in the field of Environmental Genomics, this book discusses the characterization of the structure and dynamics of life, the study of the evolution and adaptation of genes and genomes, the analysis of degraded and/or old DNA, and the functional and genomic ecology of populations and communities. It also considers access to the production and sharing of NGS data and the quality of this data. As the product of the collective discussion of the active French scientific community, the book presents not only the latest technologies in the development of new sequencing methods, but also the resulting issues, challenges and prospects, in order to identify those aspects with the greatest potential for modeling and exploring the function of ecosystems. Includes recent updates from the field of environmental genomics Provides details of advances of methods and perspectives of their use Contains a multidisciplinary overview of the environmental sciences including taxonomy, ecology, evolution, and diversity Focuses on the impact of recent technology advances in high-throughput sequencing

Omics Insights in Environmental Bioremediation Book

Omics Insights in Environmental Bioremediation


  • Author : Vineet Kumar
  • Publisher : Springer Nature
  • Release Date : 2022-09-26
  • Genre: Science
  • Pages : 706
  • ISBN 10 : 9789811943201

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Omics Insights in Environmental Bioremediation Excerpt :

Environmental pollution emanating from rapid industrialization, population growth, and urbanization has been considered a major problem in recent years that affects biodiversity, ecosystems, and human health by contaminating soil and water. This book brings out a comprehensive collection of information on valuable insights into different cutting-edge omics technologies, such as metagenomics, metatranscriptomics, metaproteomics, and metabolomics, along with advanced next-generation sequencing technologies as well as bioinformatic tools, which led to a better understanding of microbial communities and their adaptability to a wide range of contaminants and underlying their mechanisms in bioremediation and biodegradation of environmental pollutants. In addition, this edited volume provides critical insight into of potent microbial communities endowed with unique functional attributes through their unique metabolism catalyzed by ‘signature’ enzymes and degradation pathways. Step-by-step descriptions are provided of various microbial metabolic pathways of degradation and biotransformation of environmental contaminants by numerous illustrations which make the information easier to understand for the readers. Each chapter is devoted to selected examples of microbial bioremediation supported by tables, and an extensive list of references for readers interested in learning further details about the subject matter. This book is of interest to teachers, researchers to professionals, policymakers, stockholders, practitioners, environmental engineers, soil scientists, and policymakers. In addition, the book serves as additional comprehensive material for undergraduate, graduate, and doctoral students who require a working knowledge and knowhow of ‘Omics’ involved in and required for environmental remediation of legacy and emerging contaminants, will also find this to be a useful read.

Ecological Genomics Book

Ecological Genomics


  • Author : Christian R. Landry
  • Publisher : Springer Science & Business Media
  • Release Date : 2013-11-25
  • Genre: Science
  • Pages : 359
  • ISBN 10 : 9789400773479

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Ecological Genomics Excerpt :

Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.

Environmental Genomics Book

Environmental Genomics


  • Author : C. Cristofre Martin
  • Publisher : Springer Science & Business Media
  • Release Date : 2008-01-18
  • Genre: Science
  • Pages : 363
  • ISBN 10 : 9781588297778

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Environmental Genomics Excerpt :

Here is a manual for an environmental scientist who wishes to embrace genomics to answer environmental questions. The volume covers: gene expression profiling, whole genome and chromosome mutation detection, and methods to assay genome diversity and polymorphisms within a particular environment. This book provides a systematic framework for determining environmental impact and ensuring human health and the sustainability of natural populations.

An Introduction to Ecological Genomics Book

An Introduction to Ecological Genomics


  • Author : Nico M. van Straalen
  • Publisher : Oxford University Press
  • Release Date : 2012
  • Genre: Science
  • Pages : 374
  • ISBN 10 : 9780199594689

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An Introduction to Ecological Genomics Excerpt :

The authors also provide a comparative survey of the properties of genomes (genome size, gene families, synteny, and polymorphism) for prokaryotes as well as the main eukaryotic models.

Insights from Data with R Book

Insights from Data with R


  • Author : Owen L. Petchey
  • Publisher : Oxford University Press
  • Release Date : 2021-02-24
  • Genre: Mathematics
  • Pages : 272
  • ISBN 10 : 9780192589736

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Insights from Data with R Excerpt :

Experiments, surveys, measurements, and observations all generate data. These data can provide useful insights for solving problems, guiding decisions, and formulating strategy. Progressing from relatively unprocessed data to insight, and doing so efficiently, reliably, and confidently, does not come easily, and yet gaining insights from data is a fundamental skill for science as well as many other fields and often overlooked in most textbooks of statistics and data analysis. This accessible and engaging book provides readers with the knowledge, experience, and confidence to work with data and unlock essential information (insights) from data summaries and visualisations. Based on a proven and successful undergraduate course structure, it charts the journey from initial question, through data preparation, import, cleaning, tidying, checking, double-checking, manipulation, and final visualization. These basic skills are sufficient to gain useful insights from data without the need for any statistics; there is enough to learn about even before delving into that world! The book focuses on gaining insights from data via visualisations and summaries. The journey from raw data to insights is clearly illustrated by means of a comprehensive Workflow Demonstration in the book featuring data collected in a real-life study and applicable to many types of question, study, and data. Along the way, readers discover how to efficiently and intuitively use R, RStudio, and tidyverse software, learning from the detailed descriptions of each step in the instructional journey to progress from the raw data to creating elegant and informative visualisations that reveal answers to the initial questions posed. There are an additional three demonstrations online! Insights from Data with R is suitable for undergraduate students and their instructors in the life and environmental sciences seeking to harness the power of R, RStudio, and tidyverse software to master the valuable and prerequisite

Translational Cardiometabolic Genomic Medicine Book

Translational Cardiometabolic Genomic Medicine


  • Author : Annabelle Rodriguez-Oquendo
  • Publisher : Academic Press
  • Release Date : 2015-09-07
  • Genre: Science
  • Pages : 352
  • ISBN 10 : 9780128004746

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Translational Cardiometabolic Genomic Medicine Excerpt :

Translational Cardiometabolic Genomic Medicine, edited by Dr. Annabelle Rodriguez-Oquendo, is an important resource to postgraduate (medical, dental and graduate) students, postdoctoral fellows, basic scientists, and physician scientists seeking to understand and expand their knowledge base in the field of genomic medicine as it is applied to cardiometabolic diseases. This handbook integrates cutting-edge experimental approaches such as chromatin immunoprecipitation paired end tagging (CHIA-PET), to population studies such as the Multi-Ethnic Study of Atherosclerosis. It encompasses a range of book chapters that highlight bioinformatic approaches to better understanding functionality of the noncoding regions of the human genome to the use of molecular diagnostic testing in predicting increased risk of cardiovascular diseases. Where applicable, this reference also includes chapters related to therapeutic options specifically aligned to molecular targets. Provides comprehensive research on translational genomic medicine Explains state-of-the-art genome editing for stem cells and mouse models with significant relevance to human cardiometabolic disease Includes discussions on the functional effects of single nucleotide polymorphisms and cardiometabolic diseases, stratified by sex and race Encompasses a range of book chapters that highlight bioinformatic approaches to better understanding functionality of the noncoding regions of the human genome

OMICS Book

OMICS


  • Author : Debmalya Barh
  • Publisher : CRC Press
  • Release Date : 2013-03-26
  • Genre: Medical
  • Pages : 721
  • ISBN 10 : 9781466562813

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OMICS Excerpt :

With the advent of new technologies and acquired knowledge, the number of fields in omics and their applications in diverse areas are rapidly increasing in the postgenomics era. Such emerging fields—including pharmacogenomics, toxicogenomics, regulomics, spliceomics, metagenomics, and environomics—present budding solutions to combat global challenges in biomedicine, agriculture, and the environment. OMICS: Applications in Biomedical, Agricultural, and Environmental Sciences provides valuable insights into the applications of modern omics technologies to real-world problems in the life sciences. Filling a gap in the literature, it offers a broad, multidisciplinary view of current and emerging applications of omics in a single volume. Written by highly experienced active researchers, each chapter describes a particular area of omics and the associated technologies and applications. Topics covered include: Proteomics, epigenomics, and pharmacogenomics Toxicogenomics and the assessment of environmental pollutants Applications of plant metabolomics Nutrigenomics and its therapeutic applications Microalgal omics and omics approaches in biofuel production Next-generation sequencing and omics technology for transgenic plant analysis Omics approaches in crop improvement Engineering dark-operative chlorophyll synthesis Computational regulomics Omics techniques for the analysis of RNA splicing New fields, including metagenomics, glycomics, and miRNA Breast cancer biomarkers for early detection Environomics strategies for environmental sustainability This timely book explores a wide range of omics application areas in the biomedical, agricultural, and environmental sciences. Throughout, it highlights working solutions as well as open problems and future challenges. Demonstrating the diversity of omics, it introduces readers to state-of-the-art developments and trends in omics-driven research.

Proteomic and genomic techniques towards a better life in environmental research Book

Proteomic and genomic techniques towards a better life in environmental research


  • Author : Kehinde Sowunmi
  • Publisher : GRIN Verlag
  • Release Date : 2019-12-17
  • Genre: Science
  • Pages : 23
  • ISBN 10 : 9783346084255

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Proteomic and genomic techniques towards a better life in environmental research Excerpt :

Seminar paper from the year 2019 in the subject Biology - Genetics / Gene Technology, , course: Cell Biology and Genetics, language: English, abstract: Proteome is the entire set of proteins encoded by the genome and proteomics is the discipline which studies the global set of proteins, their expression, function and structure. Knowledge of proteins is thus crucial in understanding the mechanism of any biological process. Although advances in genome sequencing have allowed the identification of a number of open reading frames (ORFs), but this information is far from complete. On an average, about 40% of the gene sequences detected in the genomic databases code for proteins of hypothetical or unknown function

From Genes to Species  Novel Insights from Metagenomics Book

From Genes to Species Novel Insights from Metagenomics


  • Author : Eamonn P. Culligan
  • Publisher : Frontiers Media SA
  • Release Date : 2016-10-07
  • Genre: Microbiology
  • Pages : 231
  • ISBN 10 : 9782889199754

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From Genes to Species Novel Insights from Metagenomics Excerpt :

The majority of microbes in many environments are considered “as yet uncultured” and were traditionally considered inaccessible for study through the microbiological gold standard of pure culture. The emergence of metagenomic approaches has allowed researchers to access and study these microbes in a culture-independent manner through DNA sequencing and functional expression of metagenomic DNA in a heterologous host. Metagenomics has revealed an extraordinary degree of diversity and novelty, not only among microbial communities themselves, but also within the genomes of these microbes. This Research Topic aims to showcase the utility of metagenomics to gain insights on the microbial and genomic diversity in different environments by revealing the breadth of novelty that was in the past, largely untapped.

Microbial Environmental Genomics  MEG  Book

Microbial Environmental Genomics MEG


  • Author : Francis Martin
  • Publisher : Springer Nature
  • Release Date : 2022-12-15
  • Genre: Science
  • Pages : 370
  • ISBN 10 : 9781071628713

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Microbial Environmental Genomics MEG Excerpt :

This volume guides researchers on how to characterize, image rare, and hitherto unknown taxa and their interactions, to identify new functions and biomolecules and to understand how environmental changes condition the activity and the response of the organisms living with us and in our environment. Chapters cover different organism types (i.e., archaea, bacteria, fungi, protest, microfauna and microeukaryotes) and propose detailed protocols to produce high quality DNA, to analyse active microbial communities directly involved in complex interactions or processes through stable isotope probing, to identify and characterize of new functional genes, to image in situ interactions and to apply bioinformatics analysis tools to complex metagenomic or RNAseq sequence data. Written in the successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Microbial Environmental Genomics (MEG): Methods and Protocols, Second Edition aims to serve as a primary research reference for researchers in microbiology working to in the expanding field of molecular ecology and environmental genomics.

Molecular Biomethods Handbook Book

Molecular Biomethods Handbook


  • Author : John M. Walker
  • Publisher : Springer Science & Business Media
  • Release Date : 2008-11-04
  • Genre: Science
  • Pages : 1124
  • ISBN 10 : 1603273751

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Molecular Biomethods Handbook Excerpt :

Recent advances in the biosciences have led to a range of powerful new technologies, particularly nucleic acid, protein and cell-based methodologies. The most recent insights have come to affect how scientists investigate and define cellular processes at the molecular level. This book expands upon the techniques included in the first edition, providing theory, outlines of practical procedures, and applications for a range of techniques. Written by a well-established panel of research scientists, the book provides an up-to-date collection of methods used regularly in the authors’ own research programs.

Pseudomonas  New Insights for the Healthcare Professional  2012 Edition Book

Pseudomonas New Insights for the Healthcare Professional 2012 Edition


  • Author : Anonim
  • Publisher : ScholarlyEditions
  • Release Date : 2012-12-10
  • Genre: Medical
  • Pages : 216
  • ISBN 10 : 9781464970719

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Pseudomonas New Insights for the Healthcare Professional 2012 Edition Excerpt :

Pseudomonas: New Insights for the Healthcare Professional / 2012 Edition is a ScholarlyBrief™ that delivers timely, authoritative, comprehensive, and specialized information about Pseudomonas in a concise format. The editors have built Pseudomonas: New Insights for the Healthcare Professional / 2012 Edition on the vast information databases of ScholarlyNews.™ You can expect the information about Pseudomonas in this eBook to be deeper than what you can access anywhere else, as well as consistently reliable, authoritative, informed, and relevant. The content of Pseudomonas: New Insights for the Healthcare Professional / 2012 Edition has been produced by the world’s leading scientists, engineers, analysts, research institutions, and companies. All of the content is from peer-reviewed sources, and all of it is written, assembled, and edited by the editors at ScholarlyEditions™ and available exclusively from us. You now have a source you can cite with authority, confidence, and credibility. More information is available at http://www.ScholarlyEditions.com/.

Next Steps for Functional Genomics Book

Next Steps for Functional Genomics


  • Author : National Academies of Sciences, Engineering, and Medicine
  • Publisher : National Academies Press
  • Release Date : 2020-11-18
  • Genre: Science
  • Pages : 200
  • ISBN 10 : 9780309676762

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Next Steps for Functional Genomics Excerpt :

One of the holy grails in biology is the ability to predict functional characteristics from an organism's genetic sequence. Despite decades of research since the first sequencing of an organism in 1995, scientists still do not understand exactly how the information in genes is converted into an organism's phenotype, its physical characteristics. Functional genomics attempts to make use of the vast wealth of data from "-omics" screens and projects to describe gene and protein functions and interactions. A February 2020 workshop was held to determine research needs to advance the field of functional genomics over the next 10-20 years. Speakers and participants discussed goals, strategies, and technical needs to allow functional genomics to contribute to the advancement of basic knowledge and its applications that would benefit society. This publication summarizes the presentations and discussions from the workshop.